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FiNN documentation

  • Installation
  • Guides
  • API reference
  • Installation
  • Guides
  • API reference
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FiNNPY

  • Installation
    • 1. Automatic install
    • 2. Manual build
    • 3. Installing R & enabling statistics
  • Guides
    • General
    • Data preparation
    • Feature generation
    • Source reconstruction
    • Statistics
  • API reference
    • Basic
    • Cross frequency connectivity (cfc)
    • Cleansing
    • File IO
    • Filters
    • Misc
    • Same frequency coupling (sfc)
    • Source reconstruction
    • Statistical
    • Visualization
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  • FiNNPy API

FiNNPy API#

This section documents the functions offered by FiNNPy.

  • Basic
    • Common Average Re-Referencing
    • Downsampling
  • Cross frequency connectivity (cfc)
    • Direct Modulation Index
    • Modulation Index
    • Mean Vector Length
    • Phase Lock Value
  • Cleansing
    • Bad channel identification
    • Channel restoration
    • Outlier removal
  • File IO
    • Data manager
    • Load brainvision data
  • Filters
    • Butterwort filter
    • FIR filter
  • Misc
    • Timed Pool
  • Same frequency coupling (sfc)
    • Directional absolute coherence
    • Phase slope index
    • Weighted phase lag index
    • Imaginary coherence
    • Magnitude squared coherence
    • Complex coherency
  • Source reconstruction
    • Source space region clustering
    • Boundary element model (BEM)
    • Coregistration, MEG to MRI
    • Cortical model
    • Freesurfer methods
    • Forward model
    • Inverse model
    • Sensor covariance
    • Skull and skin models
    • Sphere models
    • Subject to fs-avg
    • Utility functions
  • Statistical
    • Generalized linear mixed model
  • Visualization
    • Topoplot

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